Both git fast-paths in ExtractionOrchestrator (sync and getChangedFiles)
classified every untracked (`??`) file as "added" without checking the
index. Indexing a file doesn't make git track it, so the file stayed `??`
and was re-reported as pending and re-indexed on every run: `codegraph
status` listed it under Pending Changes forever and each `sync` re-added
it, even though its symbols were already queryable.
Merge the modified + added handling into a single hash-compared loop so
untracked files get the same treatment as tracked ones: "added" only if
missing from the index, "modified" if contents changed, skipped otherwise.
The non-git fallback path already did this and is unchanged.
Closes#206. Reported by @15290391025.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Adds support for Dart and Liquid languages with tree-sitter parsing.
Improves accuracy of code symbol extraction for existing languages.
Indexes project files to enhance code navigation features.
Migrates build system to facilitate code contributions.
Removes git hook functionality.
Integrates Sentry for error tracking and reporting.
Enhances project initialization and configuration loading.
