Self-contained distribution: bundle Node + node:sqlite, drop better-sqlite3/wasm (closes #238) (#282)
* fix(db): eliminate concurrent-read "database is locked"; add node:sqlite backend (#238) WAL + busy_timeout were already enabled, so the issue's suggested fix was a no-op. The real causes, addressed here: - busy_timeout is now set first (before journal_mode) and lowered 120s -> 5s, so open-time pragmas wait out a lock instead of hanging for two minutes. - getCodeGraph no longer opens a second connection to the default project when a tool passes its own projectPath (the in-process lock amplifier). - The wasm fallback (no WAL) gets a bounded read-retry on SQLITE_BUSY. - New: node:sqlite backend, preferred over wasm, so installs whose native better-sqlite3 build fails land on a real-WAL backend instead of no-WAL wasm. - codegraph status / codegraph_status now report the effective journal mode, so a lock report is triageable (wal vs delete). - CLI hard-blocks Node < 20 to actually enforce the engines floor. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * refactor(db)!: node:sqlite is the sole backend; drop better-sqlite3 + wasm Now that distribution will bundle a Node 24 runtime, node:sqlite (real SQLite with WAL + FTS5) is always available. Collapse the three-backend adapter to node:sqlite only and remove the machinery the other two needed: - Remove better-sqlite3 (optionalDependency) and node-sqlite3-wasm (dependency). - Remove WasmDatabaseAdapter, the named->positional param translation, the SQLITE_BUSY read-retry, the wasm fallback banner, the backend env override, and the native/node-sqlite/wasm selection chain. - createDatabase now opens node:sqlite directly, with a clear error pointing at the bundled release / Node 22.5+ when the module is absent. - NodeSqliteAdapter.close() is idempotent and pragma() supports { simple }, to match the better-sqlite3 behavior callers relied on. - status (CLI + MCP) reports the single node:sqlite backend; journal-mode diagnostics and the getCodeGraph single-connection fix are retained. - Tests repointed off better-sqlite3 onto node:sqlite. Net -1044 lines. Running from source now requires Node 22.5+. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(dist): self-contained bundle prototype (vendored Node + install channels) Phase 3 of the node:sqlite migration: ship a vendored Node runtime so CodeGraph runs with no system Node and no native build (node:sqlite is built in). - scripts/build-bundle.sh: build a per-platform archive (official Node + dist + prod deps + launcher). Same recipe per platform; pins Node v24.16.0. - install.sh: curl|sh installer (no Node required) — detects os/arch, pulls the archive from Releases, symlinks onto PATH; re-run to upgrade, --uninstall to remove. The VPS/SSH path. - scripts/npm-shim.js: thin launcher for the npm channel — resolves the per-platform optionalDependency bundle and execs it, so `npm i -g` keeps working and the real work runs on the bundled Node regardless of the user's. - BUNDLING.md: distribution design + release-pipeline TODO (CI matrix, platform packages, code signing, brew, retiring the Node-version gate). Validated end-to-end: darwin-arm64 and linux-x64 bundles both run init + index + status (Backend: node:sqlite, Journal: wal) + FTS query with NO system Node — linux-x64 verified in a clean ubuntu:24.04 amd64 container. Release archives are gitignored; CI will produce and upload them. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(dist): add Windows PowerShell installer (install.ps1) The `irm … | iex` one-liner for Windows, mirroring install.sh: detect arch, pull the matching bundle from Releases, extract to %LOCALAPPDATA%\codegraph, add it to user PATH. Re-run to upgrade. (Windows bundle production in build-bundle.sh is still TODO.) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(dist): release workflow + npm packaging; README/CHANGELOG for bundled distro - .github/workflows/release.yml: manually-triggered (workflow_dispatch) release matrix. Builds a self-contained bundle per platform on its own runner (darwin-arm64/x64, linux-x64/arm64), publishes a GitHub Release with all archives, and publishes the npm thin-installer (shim + per-platform packages). Windows targets are TODO (build-bundle.sh is unix-only). - scripts/pack-npm.sh: assemble the npm packages from built bundles — per-platform packages tagged os/cpu + the main shim package with them as optionalDependencies (esbuild pattern). Proven locally: npm-install the tarballs, run via the shim, resolves the bundle and runs on the bundled Node 24 (node:sqlite / WAL). - README: install section now leads with the no-Node one-liners (curl|sh, irm|iex) then npm/npx; "bundled · none required" badge. - CHANGELOG: standout headline for the self-contained release, plus Added/Changed/ Removed for the install channels, node:sqlite backend, and dropped deps. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(dist): Windows bundles + single-trigger release workflow - build-bundle.sh: add win32-x64 / win32-arm64 targets — download Node's Windows zip, bundle node.exe + a .cmd launcher, output a .zip. Verified structurally (PE32+ node.exe, CRLF .cmd, portable node_modules). Since there are no native addons, any target builds on any OS, so the whole matrix builds on one runner. - pack-npm.sh: handle .zip bundles and win32 packages (os: win32, node.exe). - release.yml: simplified to your spec — manual trigger reads the version from package.json, builds all platform bundles, creates the GitHub Release with notes pulled from CHANGELOG.md, and publishes the npm shim + platform packages. - BUNDLING.md: Windows + build-anywhere notes; release pipeline documented. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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@@ -8,7 +8,7 @@
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[](https://www.npmjs.com/package/@colbymchenry/codegraph)
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[](https://opensource.org/licenses/MIT)
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[](https://nodejs.org/)
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[](https://nodejs.org/)
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[](#)
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[](#)
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@@ -23,11 +23,24 @@
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### Get Started
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**No Node.js required** — one command grabs the right build for your OS:
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```bash
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npx @colbymchenry/codegraph
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# macOS / Linux
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curl -fsSL https://raw.githubusercontent.com/colbymchenry/codegraph/main/install.sh | sh
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# Windows (PowerShell)
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irm https://raw.githubusercontent.com/colbymchenry/codegraph/main/install.ps1 | iex
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```
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<sub>Interactive installer auto-configures your agent(s) — Claude Code, Cursor, Codex CLI, opencode</sub>
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Already have Node? Use npm instead (works on any version):
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```bash
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npx @colbymchenry/codegraph # zero-install, or:
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npm i -g @colbymchenry/codegraph
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```
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<sub>CodeGraph bundles its own runtime — nothing to compile, no native build, works the same everywhere.<br />The interactive installer auto-configures your agent(s) — Claude Code, Cursor, Codex CLI, opencode.</sub>
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#### Initialize Projects
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@@ -456,10 +469,10 @@ The `.codegraph/config.json` file controls indexing:
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**Indexing is slow** — Check that `node_modules` and other large directories are excluded. Use `--quiet` to reduce output overhead.
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**Indexing is slow / MCP `database is locked` / WASM fallback active** — `codegraph` ships with a WASM SQLite fallback for environments where `better-sqlite3` (a native module, declared as `optionalDependencies`) can't install. The fallback is 5-10x slower than the native backend and uses a journal mode that lets writers block readers, so MCP queries can also hit `database is locked` while indexing runs. Run `codegraph status` and look at the `Backend:` line:
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**Indexing is slow, or MCP hits `database is locked`** — both trace to the SQLite backend. `codegraph` picks the best available, in order: native `better-sqlite3` (fastest; an `optionalDependencies` native module), then Node's built-in `node:sqlite` (Node ≥ 22.5), then a bundled WASM build. Run `codegraph status` and read the **`Backend:`** and **`Journal:`** lines:
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- `Backend: native` — you're on the fast path, nothing to do.
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- `Backend: wasm` — you're on the slow fallback. Common causes: missing C build tools, prebuilt binary unavailable for your Node version, or your Node version changed after install. Fix:
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- `Backend: native` or `node:sqlite` with `Journal: wal` — fast path with lock-free concurrent reads; nothing to do.
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- `Backend: wasm` — the native module didn't load *and* `node:sqlite` is unavailable (Node < 22.5). WASM is 5-10x slower and has no WAL, so heavy concurrent use can briefly hit `database is locked`. The simplest fix is Node ≥ 22.5 (you get `node:sqlite` automatically); otherwise restore the native backend:
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```bash
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# macOS
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@@ -479,6 +492,7 @@ The `.codegraph/config.json` file controls indexing:
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```
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After the fix, `codegraph status` should show `Backend: native`.
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- `Journal:` shows anything other than `wal` on a `native` / `node:sqlite` backend — WAL couldn't be enabled on this filesystem (common on network shares and WSL2 `/mnt`), so reads can block on writes. Move the project (with its `.codegraph/` folder) onto a local disk.
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**MCP server not connecting** — Ensure the project is initialized/indexed, verify the path in your MCP config, and check that `codegraph serve --mcp` works from the command line.
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