feat(mcp): worker-thread liveness watchdog to self-kill a wedged main thread (#856)

Belt-and-suspenders follow-up to #855. Any non-yielding sync loop on the main
thread wedges the event loop, and nothing running on that loop (timers, signal
handlers, PPID watchdog) can recover it — only another thread can.

A tiny worker thread (in the detached daemon + direct modes) watches a
shared-memory heartbeat the main thread bumps each event-loop turn; if it stops
advancing across enough consecutive checks (~CODEGRAPH_WATCHDOG_TIMEOUT_MS,
default 60s) the worker SIGKILLs the process so a fresh daemon starts on the next
connection. Counts consecutive stale checks (not wall-clock) so it's immune to
clock jumps / sleep; tuned never to fire on real work; opt out with
CODEGRAPH_NO_WATCHDOG=1.
This commit is contained in:
Colby Mchenry
2026-06-13 10:04:40 -05:00
committed by GitHub
parent 3476ac9a27
commit 576149e062
4 changed files with 340 additions and 0 deletions
+13
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@@ -51,6 +51,7 @@ import { connectWithHello, runLocalHandshakeProxy } from './proxy';
import { getDaemonSocketPath } from './daemon-paths';
import { getTelemetry } from '../telemetry';
import { supervisionLostReason } from './ppid-watchdog';
import { installMainThreadWatchdog, WatchdogHandle } from './liveness-watchdog';
import { treatStdinFailureAsShutdown } from './stdin-teardown';
import { HOST_PPID_ENV } from '../extraction/wasm-runtime-flags';
@@ -220,6 +221,9 @@ export class MCPServer {
private engine: MCPEngine | null = null;
private daemon: Daemon | null = null;
private ppidWatchdog: ReturnType<typeof setInterval> | null = null;
// Worker-thread liveness watchdog (#850). Long-lived modes only; SIGKILLs the
// process if the main thread wedges in a non-yielding sync loop.
private livenessWatchdog: WatchdogHandle | null = null;
// PPID watchdog baseline — captured at construction so we always have a
// baseline, even if start() runs after a fork-style reparent.
private originalPpid: number = process.ppid;
@@ -300,6 +304,10 @@ export class MCPServer {
clearInterval(this.ppidWatchdog);
this.ppidWatchdog = null;
}
if (this.livenessWatchdog) {
this.livenessWatchdog.stop();
this.livenessWatchdog = null;
}
if (this.daemon) {
void this.daemon.stop('stop()');
// Daemon.stop calls process.exit; nothing else to do.
@@ -345,6 +353,7 @@ export class MCPServer {
this.mode = 'direct';
this.installSignalHandlers();
this.installPpidWatchdog();
this.livenessWatchdog = installMainThreadWatchdog();
}
/**
@@ -366,6 +375,10 @@ export class MCPServer {
await daemon.start();
this.daemon = daemon;
this.mode = 'daemon';
// The detached daemon has no PPID watchdog or stdin lifeline, so a
// wedged main thread would pin a core forever (#850). The liveness
// watchdog is its only recovery path.
this.livenessWatchdog = installMainThreadWatchdog();
return; // the net.Server keeps the process alive
}
+175
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@@ -0,0 +1,175 @@
/**
* Main-thread liveness watchdog — belt-and-suspenders for #850.
*
* The #850 fix removes the one *known* trigger (the uncaught-exception handler
* no longer formats a raw Error's `.stack` — the step that could enter a
* non-terminating V8 source-position loop). But ANY synchronous, non-yielding
* loop on the main thread — a future V8 stack-format pathology, a runaway
* regex, an accidental `while (true)` — wedges the event loop, and from JS you
* cannot interrupt it: timers, signal handlers, and the PPID watchdog all run
* *on* that blocked loop, so the process pins a core forever with no
* self-recovery (the exact unrecoverable state #850 reported).
*
* The only observer still running when the main thread is wedged is another
* THREAD. This installs a tiny worker thread that watches a heartbeat the main
* thread bumps through shared memory. If the heartbeat stops advancing across
* enough consecutive checks (~`timeoutMs` of real time), the worker concludes
* the main thread is wedged and SIGKILLs the process — the one signal a wedged
* event loop can't swallow — so a fresh daemon starts on the next connection
* instead of a zombie pinning a core.
*
* **Why count checks, not elapsed wall-clock.** A laptop that sleeps freezes
* both threads; on wake `Date.now()` has jumped hours but the heartbeat sat
* still — a wall-clock delta would false-positive and kill a perfectly healthy
* daemon. Counting *consecutive worker iterations* with no progress is immune:
* a healthy main thread resumes and bumps the heartbeat within one interval of
* waking, resetting the count; only a thread that never resumes keeps it
* climbing. {@link stepHeartbeat} is the pure reducer behind both the worker
* and the unit tests.
*
* **Why it won't fire on real work.** Heavy parsing runs in the parse worker
* (off this thread) and indexing shells out to a child process, so the daemon's
* main thread only ever does fast, bounded work (socket handling + sub-second
* SQLite reads). The default timeout is therefore vastly larger than any
* legitimate main-thread block yet vastly smaller than "forever". Opt out with
* `CODEGRAPH_NO_WATCHDOG=1`; tune with `CODEGRAPH_WATCHDOG_TIMEOUT_MS`.
*/
import { Worker } from 'worker_threads';
/** Default: 60s — ~300× shorter than the 5h #850 wedge, far longer than any real main-thread block. */
export const DEFAULT_WATCHDOG_TIMEOUT_MS = 60_000;
export interface HeartbeatState {
/** Last heartbeat counter the worker observed. */
lastCounter: number;
/** Consecutive checks the counter has NOT advanced. */
staleChecks: number;
}
/**
* Pure reducer for one worker check. `maxStaleChecks` consecutive no-progress
* checks → wedged. Counting iterations (not wall-clock) is what makes this
* robust to clock jumps / system sleep.
*/
export function stepHeartbeat(
state: HeartbeatState,
counter: number,
maxStaleChecks: number
): { next: HeartbeatState; wedged: boolean } {
if (counter !== state.lastCounter) {
return { next: { lastCounter: counter, staleChecks: 0 }, wedged: false };
}
const staleChecks = state.staleChecks + 1;
return {
next: { lastCounter: counter, staleChecks },
wedged: staleChecks >= maxStaleChecks,
};
}
/** `true` for `1/true/yes/on` (case-insensitive); `false` otherwise. */
function isEnvTruthy(raw: string | undefined): boolean {
if (!raw) return false;
return ['1', 'true', 'yes', 'on'].includes(raw.trim().toLowerCase());
}
/** Parse the timeout env, falling back to the default for missing/invalid values. */
export function parseWatchdogTimeoutMs(
raw: string | undefined,
fallback: number = DEFAULT_WATCHDOG_TIMEOUT_MS
): number {
if (raw === undefined) return fallback;
const n = Number(raw);
return Number.isFinite(n) && n > 0 ? n : fallback;
}
/** Derive a heartbeat/check cadence that fires several times inside the timeout window. */
export function deriveCheckIntervalMs(timeoutMs: number): number {
return Math.min(2000, Math.max(50, Math.round(timeoutMs / 5)));
}
export interface WatchdogHandle {
/** Stop heartbeating and terminate the worker. Idempotent. */
stop(): void;
}
/**
* The worker body, run via `new Worker(src, { eval: true })`. Inlined as a
* string (not a shipped `.js`) so there is no dist-vs-src path to resolve — it
* runs identically under `tsx` in tests and under the bundle in production.
* Mirrors {@link stepHeartbeat}; keep the two in sync (the unit test pins the
* algorithm, the integration test pins this exact body end-to-end).
*/
const WORKER_SOURCE = `
const { workerData } = require('worker_threads');
const fs = require('fs');
const beat = new Int32Array(workerData.sab);
const { checkMs, maxStaleChecks } = workerData;
let lastCounter = Atomics.load(beat, 0);
let staleChecks = 0;
const timer = setInterval(() => {
const counter = Atomics.load(beat, 0);
if (counter !== lastCounter) { lastCounter = counter; staleChecks = 0; return; }
if (++staleChecks < maxStaleChecks) return;
clearInterval(timer);
const secs = Math.round((staleChecks * checkMs) / 1000);
try {
fs.writeSync(2, '[CodeGraph] Main thread unresponsive for ~' + secs + 's — killing the wedged process so a fresh one can start (#850). Disable with CODEGRAPH_NO_WATCHDOG=1.\\n');
} catch (e) { /* stderr gone */ }
try { process.kill(process.pid, 'SIGKILL'); } catch (e) { /* nothing left to try */ }
}, checkMs);
`;
/**
* Install the main-thread liveness watchdog for a long-lived process. Returns a
* handle to stop it, or `null` when disabled or when the worker can't be
* spawned (degraded, never throws — a missing watchdog must never keep a
* process from starting).
*/
export function installMainThreadWatchdog(): WatchdogHandle | null {
if (isEnvTruthy(process.env.CODEGRAPH_NO_WATCHDOG)) return null;
const timeoutMs = parseWatchdogTimeoutMs(process.env.CODEGRAPH_WATCHDOG_TIMEOUT_MS);
const checkMs = deriveCheckIntervalMs(timeoutMs);
const maxStaleChecks = Math.max(1, Math.ceil(timeoutMs / checkMs));
// Single Int32 counter in shared memory. The main thread bumps it each tick;
// the worker reads it. Atomics make the write visible across threads.
const sab = new SharedArrayBuffer(Int32Array.BYTES_PER_ELEMENT);
const beat = new Int32Array(sab);
// The heartbeat: firing at all means the event loop is turning. unref'd so it
// never keeps the process alive on its own (the server's socket does that).
const heartbeat = setInterval(() => {
Atomics.add(beat, 0, 1);
}, checkMs);
heartbeat.unref();
let worker: Worker;
try {
worker = new Worker(WORKER_SOURCE, {
eval: true,
workerData: { sab, checkMs, maxStaleChecks },
});
} catch {
// Worker threads unavailable — fall back to no watchdog rather than refuse
// to start. Degraded (a future wedge wouldn't self-kill) but not broken.
clearInterval(heartbeat);
return null;
}
// A watchdog-worker error must never escalate to the global handler (which now
// exits, #850): swallow it and run degraded.
worker.on('error', () => { /* watchdog gone; nothing safe to do here */ });
// Don't let the watchdog keep the process alive past its real work.
worker.unref();
let stopped = false;
return {
stop(): void {
if (stopped) return;
stopped = true;
clearInterval(heartbeat);
void worker.terminate();
},
};
}